List of Publications
2024
- Streak artefact removal in x-ray dark-field computed tomography using a convolutional neural network. Medical Physics 51, 2024 DOI
- Joint-Individual Fusion Structure with Fusion Attention Module for Multi-Modal Skin Cancer Classification. Pattern Recognition 154, 2024 DOI
- Robust Sample Information Retrieval in Dark-Field Computed Tomography with a Vibrating Talbot-Lau Interferometer. IEEE Transactions on Medical Imaging , 2024 DOI
- Improving Automated Hemorrhage Detection in Sparse-view Computed Tomography via Deep Convolutional Neural Network based Artifact Reduction. Radiology: Artificial Intelligence 6, 2024 DOI
- Improving image quality of sparse-view lung tumor CT images with U-Net. European Radiology Experimental 8, 2024 DOI
- Language model-based labeling of German thoracic radiology reports. Fortschr Röntgenstr , 2024 DOI
- elsa: an elegant framework for tomographic reconstruction. Journal of Open Source Software 9, 2024 DOI
- German CheXpert Chest X-ray Radiology Report Labeler. Fortschr Röntgenstr 196, 2024 DOI
- Fast light-field 3D microscopy with out-of-distribution detection and adaptation through Conditional Normalizing Flows. Biomedical Optics Express 15, 2024 DOI
- Out-of-distribution detection with in-distribution voting using the medical example of chest X-ray classification. Medical Physics 51, 2024 DOI
- Automatisiertes Labeling Deutscher Röntgenthoraxbefunde durch Deep Learning. 105. Deutscher Röntgenkongress, Wiesbaden, Germany, May, 2024
- Deutscher CheXpert Röntgenthorax Befundlabeler. 105. Deutscher Röntgenkongress, Wiesbaden, Germany, May, 2024
- Optimierung der Klassifikationsleistung von maschinellen Lernmodellen in Röntgen-Thoraxaufnahmen durch Adaptive Multiple Fensterung mithilfe von Windownet. 105. Deutscher Röntgenkongress, Wiesbaden, Germany, May, 2024
- curadon: an Open-Source Foundational Library for Highly Efficient Differentiable Projectors in X-ray Computed Tomography. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Bamberg, Germany, August, 2024
- Improving Automated Hemorrhage Detection in Sparse-view Computed Tomography via U-Net based Artifact Reduction. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Bamberg, Germany, August, 2024
- Prior and Prediction Inverse Kernel Transformer for Single Image Defocus Deblurring. Annual AAAI Conference on Artificial Intelligence, Vancouver, Canada, February, 2024
- Implementation of the German Lung Cancer Screening Protocol and Image Quality Evaluation over Three Generations of CT Systems. European Congress of Radiology, Vienna, Austria, February, 2024
- Advancing X-ray Dark-Field Imaging for Human-Scale Applications: Helical CT and Surview Imaging. SPIE Medical Imaging, San Diego, USA, February, 2024 DOI
- Single-Shared Network with Prior-Inspired Loss for Parameter-Efficient Multi-Modal Imaging Skin Lesion Classification. arXiv:2403.19203, 2024 DOI
- Sparsity-based background removal for STORM super-resolution images. arXiv:2401.07746, 2024 DOI
2023
- WindowNet: Learnable Windows for Chest X-ray Classification. Journal of Imaging 9, 2023 DOI
- Runtime optimization of acquisition trajectories for X-ray computed tomography with a robotic sample holder. Engineering Research Express 5, 2023 DOI
- Revealing clinically relevant specific IgE sensitization patterns in Hymenoptera venom allergy with dimension reduction and clustering. World Allergy Organization Journal 16, 2023 DOI
- Spherical acquisition trajectories for X-ray computed tomography with a robotic sample holder. Engineering Research Express 5, 2023 DOI
- Advanced Phase-Retrieval for Stepping-Free X-Ray Dark-Field Computed Tomography. IEEE Transactions on Medical Imaging 42, 2023 DOI
- Attention-based Saliency Maps Improve Interpretability of Pneumothorax Classification. Radiology: Artificial Intelligence 5, 2023 DOI
- WNet: A Data-driven Dual-domain Denoising Model for Sparse-view Computed Tomography with a Trainable Reconstruction Layer. IEEE Transactions on Computational Imaging 9, 2023 DOI
- Outlier Detection in Dermatology: Performance of different Convolutional Neural Networks for Binary Classification of Inflammatory Skin Diseases. Journal of the European Academy of Dermatology and Venereology 9, 2023 DOI
- An update to elsa - an elegant framework for tomographic reconstruction. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Stony Brook, USA, July, 2023
- Translating sparse sinogram measurements into reconstruction patches without geometry information via the attention mechanism. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Stony Brook, USA, July, 2023
- Spherical acquisition trajectories for X-ray Computed Tomography with a robotic sample holder. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Stony Brook, USA, July, 2023
- X-ray Dark-Field Imaging at the Human Scale: Helical Computed Tomography and Surview Imaging. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Stony Brook, USA, July, 2023
- Equilibrium: Optimization of Ceph Cluster Storage by Size-Aware Shard Balancing arXiv:2310.15805, 2023 DOI
- R-R2KAC: Improving Single Image Defocus Deblurring. arXiv:2307.16242, 2023 DOI
- Graph-Ensemble Learning Model for Multi-label Skin Lesion Classification using Dermoscopy and Clinical Images. arXiv:2307.01704, 2023 DOI
- Higher Chest X-ray Resolution Improves Classifi- cation Performance. arXiv:2306.06051, 2023 DOI
- Transformer-based interpretable multi- modal data fusion for skin lesion classification. arXiv:2304.14505, 2023 DOI
- Optimizing Convolutional Neural Networks for Chronic Obstructive Pulmonary Disease Detection in Clinical Computed Tomography Imaging. arXiv:2303.07189, 2023 DOI
2022
- Modeling vibrations of a tiled Talbot-Lau interferometer on a clinical CT. IEEE Transactions on Medical Imaging 42, 2022 DOI
- X-ray computed tomography with seven degree of freedom robotic sample holder. Engineering Research Express 4, 2022 DOI
- Deep learning-based classification of dermatological lesions given a limited amount of labeled data. Journal of the European Academy of Dermatology and Venereology 36, 2022 DOI
- Risks and benefits of dermatological machine learning healthcare applications - an overview an ethical analysis. Journal of the European Academy of Dermatology and Venereology 36, 2022 DOI
- Dark-field computed tomography reaches the human scale. Proceedings of the National Academy of Sciences of the United States of America 119, 2022 DOI
- FusionM4Net: A multi-stage multi-modal learning algorithm for multi-label skin lesion classification. Medical Image Analysis 76, 2022 DOI
- Hybrid Reconstruction Using Shearlets and Deep Learning for Sparse X-ray Computed Tomography. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Baltimore, USA, June, 2022 DOI
- Geometric calibration of seven degree of freedom Robotic Sample Holder for X-ray CT. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Baltimore, USA, June, 2022 DOI
- Dark-Field Imaging on a Clinical CT System: Performance and Potential based on first Results. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Baltimore, USA, June, 2022 DOI
- Dark-Field Imaging on a Clinical CT System: Modelling of Interferometer Vibrations. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Baltimore, USA, June, 2022 DOI
- Dark-Field Imaging on a Clinical CT System: Sample Data Processing and Reconstruction. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Baltimore, USA, June, 2022 DOI
- Performance and Potential of Human Sized Dark-Field CT Based on Recent Results. IEEE Medical Imaging Conference, Milano, Italy, November, 2022
- Modelling vibrations of a Talbot-Lau interferometer with tiled analyzer grating on a clinical CT system. IEEE Medical Imaging Conference, Milano, Italy, November, 2022
- Sample Data Processing of the First Clinical Dark-Field CT Prototype. IEEE Medical Imaging Conference, Milano, Italy, November, 2022
- Task-specific Performance Prediction and Acquisition Optimization for Anisotropic X-ray Dark-field Tomography. arXiv:2207.00332, 2022 DOI
2021
- Learning to Reconstruct Confocal Microscopy Stacks From Single Light Field Images. IEEE Transactions on Computational Imaging 7, 2021 DOI
- Real-Time Light Field 3D Microscopy via Sparsity-Driven Learned Deconvolution. IEEE, International Conference on Computational Photography (ICCP), Haifa, Israel, May, 2021 DOI
- Laplace-Beltrami Regularization for Anisotropic X-ray Dark-field Tomography. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Leuven, Belgium, July, 2021
- A Deep Residual Dual Domain Learning Network for Sparse X-ray Computed Tomography. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Leuven, Belgium, July, 2021
2020
- What about computational super-resolution in fluorescence Fourier light field microscopy? Optics Express 28, 2020 DOI
- elsa – an elegant framework for precision learning in tomographic recon- struction. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Regensburg, Germany, August, 2020
- Deep Learning Acceleration of OS-SIRT in X-ray Cone-Beam Computed Tomography. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Regensburg, Germany, August, 2020
- Fast Task-Driven Acquisition Optimization for Anisotropic X-ray Dark-field Tomography. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Regensburg, Germany, August, 2020
- X-ray Computed Tomography with a Robotic Sample Holder. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Regensburg, Germany, August, 2020
- 3D deconvolution in Fourier integral microscopy. SPIE Defense + Commercial Sensing, Computational Imaging V, Anaheim, USA, April, 2020
- Learning to Model and Calibrate Optics via a Differentiable Wave Optics Simulator. IEEE, International Conference on Image Processing (ICIP), Abu Dhabi, United Arab Emirates, October, 2020 DOI
- Fluorescence diffusion correction through a spatially variant deconvolution scheme. SPIE Photonics West BIOS, San Francisco, USA, February, 2020
2019
- Artifact-free deconvolution in light field microscopy. Optics Express 27, 2019 DOI
- A gentle introduction to deep learning in medical image processing. Zeitschrift für medizinische Physik 29, 2019 DOI
- Fluorescence imaging reversion using spatially variant deconvolution. Scientific Reports 9, 2019 DOI
- Task-driven Acquisition in Anisotropic X-ray Dark-Field Tomography. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Philadelphia, USA, June, 2019 DOI
- elsa - an elegant framework for tomographic reconstruction. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Philadelphia, USA, June, 2019 DOI
2018
- Brain Connectivity Exposed by Anisotropic X-ray Dark-field Tomography. Scientific Reports 8, 2018 DOI
- Trochoidal X-ray Vector Radiography: Directional Dark-field Without Grating Stepping. Applied Physics Letters 112, 2018 DOI
- Low-Dose CT Perfusion of the Liver using Reconstruction of Difference. IEEE Transactions on Radiation and Plasma Medical Sciences 2, 2018 DOI
- Incorporating a Noise Reduction Technique into X-ray Tensor Tomography. IEEE Transactions on Computational Imaging 4, 2018 DOI
- Detectability Indices in Anisotropic X-ray Dark-Field Tomography International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Salt Lake City, USA, May, 2018
2017
- NeuBtracker – an imaging platform for interrogating neurobehavioral dynamics in freely behaving fish. Nature Methods 14, 2017 DOI
- Design of Acquisition Schemes and Setup Geometry for Anisotropic X-ray Dark-Field Tomography (AXDT). Scientific Reports 7, 2017 DOI
- Evaluation of Low-Dose CT Perfusion for the Liver using Reconstruction of Difference. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Xi'an, China, June, 2017
- Acquisition Schemes for Directional Dark-field Tomographic Modalities. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Xi'an, China, June, 2017
- Statistical Models for Anisotropic X-Ray Dark- field Tomography. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Xi'an, China, June, 2017
- Micro-structure orientation extraction for Anisotropic X-Ray Dark- Field Tomography. Fully3 Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully 3D), Xi'an, China, June, 2017
- Concurrent segmentation and localization for tracking of surgical instruments. International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Quebec, Canada, September, 2017 DOI
- Automatic Initialization and Failure Detection for Surgical Tool Tracking in Retinal Microsurgery. Bildverarbeitung für die Medizin (BVM), Heidelberg, Germany, March, 2017
2016
- Anisotropic X-ray Dark-Field Tomography: A Continuous Model and its Discretization. Physical Review Letters 117, 2016 DOI
- Flexible Mini Gamma Camera Reconstructions of Extended Sources using Step and Shoot and List Mode. Medical Physics 43, 2016 DOI
- Six dimensional X-ray Tensor Tomography with a compact laboratory setup. Applied Physics Letters 109, 2016 DOI
- Combined tensor fitting and TV regularization in diffusion tensor imaging based on a Riemannian manifold approach. IEEE Transactions on Medical Imaging 35, 2016 DOI
- Object Specific Trajectory Optimization for Industrial X-ray Computed Tomography. Scientific Reports 6, 2016 DOI
- A Regularized X-ray Tensor Tomography Reconstruction Technique. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Bamberg, Germany, April, 2016
- X-ray Tensor Tomography: How much to measure? International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Bamberg, Germany, April, 2016
- X-ray tensor tomography - a linear system ap- proach to reconstruction. International Conference on Image Formation in X-ray Computed Tomography (CT Meeting), Bamberg, Germany, April, 2016
- Component-based TV regularization for X-ray Tensor Tomography. International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, April, 2016
- Real-Time Online Adaption for Robust Instrument Tracking and Pose Estimation. International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), Athens, Greece, October, 2016 DOI